Magnaporthe grisea Summary Genome Statistics
Genome Coverage
| Coding DNA as % of Total: | 40.5 |
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| Genic DNA as % of Total: | 48.2 |
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| Gene Density: | 1 Gene per 3489.4 bp |
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| CONTIG | EXON | GENE | CODING | INTERGENIC | INTRON | NONCODING
|
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| count | 2273 | 32073 | 11108 | 11108 | 13351 | 20965 | 34309 |
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| total length (BP) | 38760322 | 15709794 | 18698797 | 15709794 | 20067837 | 2994539 | 23063700 |
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| coverage | 100.0 | 40.5 | 48.2 | 40.5 | 51.8 | 7.7 | 59.5 |
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| GC% | 51.6% | 57.4% | 55.6% | 57.4% | 47.9% | 46.5% | 47.7% |
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| min length | 2002 | 1 | 75 | 30 | 1 | 50 | 1 |
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| max length | 173602 | 18210 | 20190 | 19761 | 20144 | 7456 | 20144 |
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| median length | 10054 | 247 | 1397 | 1152 | 1051 | 94 | 165 |
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| mean length | 17052 | 490 | 1683 | 1414 | 1503 | 143 | 672 |
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Average Positions of Introns within Genes
[ Download tab delimited ]
| Codon | Amino Acid | Count | Usage |
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| Codon | Amino Acid | Count | Usage |
| * | * | 5237429 | 100.00% |
| AAA | K | 68376 | 1.31% |
| AAC | N | 135367 | 2.58% |
| AAG | K | 181719 | 3.47% |
| AAT | N | 50045 | 0.96% |
| ACA | T | 58601 | 1.12% |
| ACC | T | 113116 | 2.16% |
| ACG | T | 84740 | 1.62% |
| ACT | T | 50276 | 0.96% |
| AGA | R | 34302 | 0.65% |
| AGC | S | 106318 | 2.03% |
| AGG | R | 68413 | 1.31% |
| AGT | S | 35426 | 0.68% |
| ATA | I | 37299 | 0.71% |
| ATC | I | 128613 | 2.46% |
| ATG | M | 115322 | 2.20% |
| ATT | I | 62750 | 1.20% |
| CAA | Q | 76003 | 1.45% |
| CAC | H | 81621 | 1.56% |
| CAG | Q | 138527 | 2.64% |
| CAT | H | 40503 | 0.77% |
| CCA | P | 70066 | 1.34% |
| CCC | P | 100946 | 1.93% |
| CCG | P | 94178 | 1.80% |
| CCT | P | 66520 | 1.27% |
| CGA | R | 41828 | 0.80% |
| CGC | R | 98358 | 1.88% |
| CGG | R | 57464 | 1.10% |
| CGT | R | 42422 | 0.81% |
| CTA | L | 31967 | 0.61% |
| CTC | L | 124995 | 2.39% |
| CTG | L | 138240 | 2.64% |
| CTT | L | 66830 | 1.28% |
| GAA | E | 96844 | 1.85% |
| GAC | D | 191908 | 3.66% |
| GAG | E | 211499 | 4.04% |
| GAT | D | 106280 | 2.03% |
| GCA | A | 91061 | 1.74% |
| GCC | A | 202443 | 3.87% |
| GCG | A | 105285 | 2.01% |
| GCT | A | 91477 | 1.75% |
| GGA | G | 68300 | 1.30% |
| GGC | G | 177143 | 3.38% |
| GGG | G | 61650 | 1.18% |
| GGT | G | 78859 | 1.51% |
| GTA | V | 30970 | 0.59% |
| GTC | V | 137949 | 2.63% |
| GTG | V | 90933 | 1.74% |
| GTT | V | 64327 | 1.23% |
| TAA | $ | 3102 | 0.06% |
| TAC | Y | 93391 | 1.78% |
| TAG | $ | 3221 | 0.06% |
| TAT | Y | 38734 | 0.74% |
| TCA | S | 51827 | 0.99% |
| TCC | S | 77370 | 1.48% |
| TCG | S | 93439 | 1.78% |
| TCT | S | 53787 | 1.03% |
| TGA | $ | 5185 | 0.10% |
| TGC | C | 48061 | 0.92% |
| TGG | W | 77030 | 1.47% |
| TGT | C | 19084 | 0.36% |
| TTA | L | 16256 | 0.31% |
| TTC | F | 105048 | 2.01% |
| TTG | L | 67052 | 1.28% |
| TTT | F | 76763 | 1.47% |
| Legend | 0 | 1-6 | 7-10 | 11+ | genes per 25000 BP |
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